Carnation DB

Dca20169.1

Annotation

6-exons
f-1
sp|F6HFU6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g00450#GO:0016020#0F0P1C
sp|B9HIE8_POPTR#Magnesium transporter#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_564302#GO:0016020#0F0P1C
Repeat List (scaffold207)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20169.1	3	420	421	70.78	418	71	2e-163
Target_name	Start	End	Length	Cov(%)
sp\|F6HFU6_VITVI	9	420	421	97.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20169.1	7	421	421	64.6	415	64	9e-140
Target_name	Start	End	Length	Cov(%)
AT2G03620.1	9	421	421	98.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold207	Augus-PASA	mRNA	18215	21249	.	-	.	ID=Dca20169.1;Parent=Dca20169
scaffold207	Augus-PASA	exon	18215	18445	.	-	.	ID=Dca20169.1.exon1;Parent=Dca20169.1
scaffold207	Augus-PASA	exon	18567	18614	.	-	.	ID=Dca20169.1.exon2;Parent=Dca20169.1
scaffold207	Augus-PASA	exon	19134	19511	.	-	.	ID=Dca20169.1.exon3;Parent=Dca20169.1
scaffold207	Augus-PASA	exon	19728	19856	.	-	.	ID=Dca20169.1.exon4;Parent=Dca20169.1
scaffold207	Augus-PASA	exon	20167	20237	.	-	.	ID=Dca20169.1.exon5;Parent=Dca20169.1
scaffold207	Augustus	exon	20841	21249	.	-	.	ID=Dca20169.1.exon6;Parent=Dca20169.1