Carnation DB

Dca20289.1

Annotation

8-exons
f-1
sp|E0CNY1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g08600#unknown#0F0P0C
sp|B9R6V4_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1586090#unknown#0F0P0C
Repeat List (scaffold208)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20289.1	33	378	378	53.17	346	54	3e-92
Target_name	Start	End	Length	Cov(%)
sp\|E0CNY1_VITVI	58	430	430	86.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20289.1	4	378	378	45.5	375	44	7e-63
Target_name	Start	End	Length	Cov(%)
AT1G10120.1	6	366	366	98.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold208	Augustus	mRNA	36049	38883	.	+	.	ID=Dca20289.1;Parent=Dca20289
scaffold208	Augustus	exon	36049	36501	.	+	.	ID=Dca20289.1.exon1;Parent=Dca20289.1
scaffold208	Augustus	exon	37068	37298	.	+	.	ID=Dca20289.1.exon2;Parent=Dca20289.1
scaffold208	Augus-PASA	exon	37397	37462	.	+	.	ID=Dca20289.1.exon3;Parent=Dca20289.1
scaffold208	Augus-PASA	exon	37565	37633	.	+	.	ID=Dca20289.1.exon4;Parent=Dca20289.1
scaffold208	Augus-PASA	exon	37773	37844	.	+	.	ID=Dca20289.1.exon5;Parent=Dca20289.1
scaffold208	Augus-PASA	exon	37955	38095	.	+	.	ID=Dca20289.1.exon6;Parent=Dca20289.1
scaffold208	Augus-PASA	exon	38211	38292	.	+	.	ID=Dca20289.1.exon7;Parent=Dca20289.1
scaffold208	Augus-PASA	exon	38861	38883	.	+	.	ID=Dca20289.1.exon8;Parent=Dca20289.1