Carnation DB

Dca20348.1

Annotation

5-exons
f-1
sp|A9PHS2_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0010181;GO:0016491#2F0P0C
AT2G04690.1 | Symbols: | Pyridoxamine 5'-phosphate oxidase family protein | chr2:1644628-1646179 FORWARD LENGTH=210
Repeat List (scaffold20846)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20348.1	1	174	174	66.66	174	67	7e-69
Target_name	Start	End	Length	Cov(%)
sp\|A9PHS2_POPTR	16	186	208	82.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20348.1	2	174	174	59.19	173	60	2e-58
Target_name	Start	End	Length	Cov(%)
AT2G04690.1	20	188	210	80.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold20846	Augus-PASA	mRNA	262	1210	.	-	.	ID=Dca20348.1;Parent=Dca20348
scaffold20846	Augus-PASA	exon	262	336	.	-	.	ID=Dca20348.1.exon1;Parent=Dca20348.1
scaffold20846	Augus-PASA	exon	449	527	.	-	.	ID=Dca20348.1.exon2;Parent=Dca20348.1
scaffold20846	Augus-PASA	exon	635	836	.	-	.	ID=Dca20348.1.exon3;Parent=Dca20348.1
scaffold20846	Augus-PASA	exon	948	983	.	-	.	ID=Dca20348.1.exon4;Parent=Dca20348.1
scaffold20846	Augus-PASA	exon	1080	1210	.	-	.	ID=Dca20348.1.exon5;Parent=Dca20348.1