Dca20403.1
Annotation
- 3-exons
- f-1
- sp|D7L1U6_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_319835#GO:0016021#0F0P1C
- AT2G21600.1 | Symbols: ATRER1B, RER1B | endoplasmatic reticulum retrieval protein 1B | chr2:9243550-9244579 FORWARD LENGTH=195
- Repeat List (scaffold209)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20403.1 |
6 |
197 |
197 |
73.09 |
192 |
75 |
6e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L1U6_ARALL |
5 |
193 |
193 |
97.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20403.1 |
5 |
197 |
197 |
73.6 |
193 |
76 |
6e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G21600.1 |
3 |
195 |
195 |
98.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold209 |
Augustus |
mRNA |
70890 |
73472 |
. |
+ |
. |
ID=Dca20403.1;Parent=Dca20403 |
| scaffold209 |
Augustus |
exon |
70890 |
71245 |
. |
+ |
. |
ID=Dca20403.1.exon1;Parent=Dca20403.1 |
| scaffold209 |
Augus-PASA |
exon |
73139 |
73319 |
. |
+ |
. |
ID=Dca20403.1.exon2;Parent=Dca20403.1 |
| scaffold209 |
Augus-PASA |
exon |
73416 |
73472 |
. |
+ |
. |
ID=Dca20403.1.exon3;Parent=Dca20403.1 |
