Carnation DB

Dca20470.1

Annotation

5-exons
f-1
sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
Repeat List (scaffold2096)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20470.1	174	888	892	50.56	715	59	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AUE6_VITVI	350	1109	2026	37.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20470.1	187	875	892	28.36	689	32	2e-95
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	594	1379	1401	56.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2096	Augustus	mRNA	25484	29224	.	-	.	ID=Dca20470.1;Parent=Dca20470
scaffold2096	Augustus	exon	25484	26435	.	-	.	ID=Dca20470.1.exon1;Parent=Dca20470.1
scaffold2096	Augustus	exon	26574	27525	.	-	.	ID=Dca20470.1.exon2;Parent=Dca20470.1
scaffold2096	Augustus	exon	27687	27938	.	-	.	ID=Dca20470.1.exon3;Parent=Dca20470.1
scaffold2096	Augustus	exon	28618	28790	.	-	.	ID=Dca20470.1.exon4;Parent=Dca20470.1
scaffold2096	Augustus	exon	28875	29224	.	-	.	ID=Dca20470.1.exon5;Parent=Dca20470.1