Dca20522.1
Annotation
- 3-exons
- f-1
- sp|B9IIE5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576428#GO:0005488#1F0P0C
- AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:8926110-8927722 FORWARD LENGTH=490
- Repeat List (scaffold21)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20522.1 |
33 |
473 |
481 |
37.83 |
441 |
39 |
5e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IIE5_POPTR |
43 |
505 |
505 |
91.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20522.1 |
51 |
440 |
481 |
32.43 |
390 |
37 |
6e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G20710.1 |
39 |
456 |
490 |
85.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold21 |
Augustus |
mRNA |
60368 |
62570 |
. |
- |
. |
ID=Dca20522.1;Parent=Dca20522 |
| scaffold21 |
Augustus |
exon |
60368 |
60784 |
. |
- |
. |
ID=Dca20522.1.exon1;Parent=Dca20522.1 |
| scaffold21 |
Augustus |
exon |
60884 |
61603 |
. |
- |
. |
ID=Dca20522.1.exon2;Parent=Dca20522.1 |
| scaffold21 |
Augustus |
exon |
62262 |
62570 |
. |
- |
. |
ID=Dca20522.1.exon3;Parent=Dca20522.1 |
