Carnation DB

Dca20586.1

Annotation

8-exons
f-1
sp|E0CV63_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g01680#GO:0005488#1F0P0C
AT5G53080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:21520624-21523158 FORWARD LENGTH=564
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20586.1	10	558	560	57.85	549	59	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CV63_VITVI	5	557	559	98.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20586.1	84	541	560	48.39	458	60	2e-163
Target_name	Start	End	Length	Cov(%)
AT5G53080.1	88	545	564	81.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augustus	mRNA	585750	588833	.	+	.	ID=Dca20586.1;Parent=Dca20586
scaffold21	Augustus	exon	585750	585973	.	+	.	ID=Dca20586.1.exon1;Parent=Dca20586.1
scaffold21	Augustus	exon	586067	586340	.	+	.	ID=Dca20586.1.exon2;Parent=Dca20586.1
scaffold21	Augustus	exon	586449	586599	.	+	.	ID=Dca20586.1.exon3;Parent=Dca20586.1
scaffold21	Augustus	exon	586810	587032	.	+	.	ID=Dca20586.1.exon4;Parent=Dca20586.1
scaffold21	Augustus	exon	587145	587236	.	+	.	ID=Dca20586.1.exon5;Parent=Dca20586.1
scaffold21	Augustus	exon	587724	587859	.	+	.	ID=Dca20586.1.exon6;Parent=Dca20586.1
scaffold21	Augustus	exon	588149	588480	.	+	.	ID=Dca20586.1.exon7;Parent=Dca20586.1
scaffold21	Augustus	exon	588583	588833	.	+	.	ID=Dca20586.1.exon8;Parent=Dca20586.1