Carnation DB

Dca20589.1

Annotation

9-exons
f-1
sp|E0CV55_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g01760#GO:0009966#0F1P0C
sp|D2K8N5_NICBE#Tap46#Nicotiana benthamiana#Name=Tap46#GO:0009966#0F1P0C
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20589.1	1	401	401	74.31	401	74	5e-174
Target_name	Start	End	Length	Cov(%)
sp\|E0CV55_VITVI	1	403	403	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20589.1	6	401	401	71.07	396	72	2e-167
Target_name	Start	End	Length	Cov(%)
AT5G53000.1	6	405	405	98.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augus-PASA	mRNA	604979	609490	.	+	.	ID=Dca20589.1;Parent=Dca20589
scaffold21	Augus-PASA	exon	604979	605074	.	+	.	ID=Dca20589.1.exon1;Parent=Dca20589.1
scaffold21	Augus-PASA	exon	605158	605280	.	+	.	ID=Dca20589.1.exon2;Parent=Dca20589.1
scaffold21	Augus-PASA	exon	606688	606774	.	+	.	ID=Dca20589.1.exon3;Parent=Dca20589.1
scaffold21	Augus-PASA	exon	606860	606964	.	+	.	ID=Dca20589.1.exon4;Parent=Dca20589.1
scaffold21	Augus-PASA	exon	607098	607259	.	+	.	ID=Dca20589.1.exon5;Parent=Dca20589.1
scaffold21	Augus-PASA	exon	607674	607709	.	+	.	ID=Dca20589.1.exon6;Parent=Dca20589.1
scaffold21	Augus-PASA	exon	607802	607873	.	+	.	ID=Dca20589.1.exon7;Parent=Dca20589.1
scaffold21	Augus-PASA	exon	608450	608724	.	+	.	ID=Dca20589.1.exon8;Parent=Dca20589.1
scaffold21	Augus-PASA	exon	609241	609490	.	+	.	ID=Dca20589.1.exon9;Parent=Dca20589.1