Carnation DB

Dca20591.1

Annotation

8-exons
f-1
sp|B9I565_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_569505#GO:0016021#0F0P1C
AT1G01340.2 | Symbols: CNGC10 | cyclic nucleotide gated channel 10 | chr1:132414-135216 REVERSE LENGTH=711
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20591.1	29	732	733	68.34	704	71	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I565_POPTR	11	709	709	98.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20591.1	29	732	733	67.12	704	69	0
Target_name	Start	End	Length	Cov(%)
AT5G53130.1	11	716	716	98.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augustus	mRNA	629530	633884	.	+	.	ID=Dca20591.1;Parent=Dca20591
scaffold21	Augustus	exon	629530	629537	.	+	.	ID=Dca20591.1.exon1;Parent=Dca20591.1
scaffold21	Augustus	exon	630186	630260	.	+	.	ID=Dca20591.1.exon2;Parent=Dca20591.1
scaffold21	Augustus	exon	631067	631607	.	+	.	ID=Dca20591.1.exon3;Parent=Dca20591.1
scaffold21	Augustus	exon	631946	632194	.	+	.	ID=Dca20591.1.exon4;Parent=Dca20591.1
scaffold21	Augus-PASA	exon	632287	632567	.	+	.	ID=Dca20591.1.exon5;Parent=Dca20591.1
scaffold21	Augus-PASA	exon	632674	632785	.	+	.	ID=Dca20591.1.exon6;Parent=Dca20591.1
scaffold21	Augus-PASA	exon	632865	633101	.	+	.	ID=Dca20591.1.exon7;Parent=Dca20591.1
scaffold21	Augus-PASA	exon	633186	633884	.	+	.	ID=Dca20591.1.exon8;Parent=Dca20591.1