Carnation DB

Dca20612.1

Annotation

10-exons
f-1
sp|A9PHI7_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0000166#2F0P0C
AT5G53180.1 | Symbols: ATPTB2, PTB2 | polypyrimidine tract-binding protein 2 | chr5:21568393-21571537 REVERSE LENGTH=429
Repeat List (scaffold21)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20612.1	1	434	436	78.66	434	77	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PHI7_POPTR	1	436	442	98.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20612.1	1	339	436	66.97	339	87	4e-178
Target_name	Start	End	Length	Cov(%)
AT5G53180.1	1	339	429	79.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold21	Augustus	mRNA	905846	911344	.	-	.	ID=Dca20612.1;Parent=Dca20612
scaffold21	Augustus	exon	905846	906169	.	-	.	ID=Dca20612.1.exon1;Parent=Dca20612.1
scaffold21	Augustus	exon	906582	906694	.	-	.	ID=Dca20612.1.exon2;Parent=Dca20612.1
scaffold21	Augustus	exon	907193	907274	.	-	.	ID=Dca20612.1.exon3;Parent=Dca20612.1
scaffold21	Augustus	exon	907352	907456	.	-	.	ID=Dca20612.1.exon4;Parent=Dca20612.1
scaffold21	Augustus	exon	908006	908063	.	-	.	ID=Dca20612.1.exon5;Parent=Dca20612.1
scaffold21	Augustus	exon	908147	908242	.	-	.	ID=Dca20612.1.exon6;Parent=Dca20612.1
scaffold21	Augustus	exon	908624	908697	.	-	.	ID=Dca20612.1.exon7;Parent=Dca20612.1
scaffold21	Augustus	exon	908891	908953	.	-	.	ID=Dca20612.1.exon8;Parent=Dca20612.1
scaffold21	Augustus	exon	910058	910267	.	-	.	ID=Dca20612.1.exon9;Parent=Dca20612.1
scaffold21	Augustus	exon	911159	911344	.	-	.	ID=Dca20612.1.exon10;Parent=Dca20612.1