Carnation DB

Dca20641.1

Annotation

12-exons
f-1
sp|D7U9M6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0062g01080#unknown#0F0P0C
sp|A2Q5B8_MEDTR#Eukaryotic translation initiation factor 3 subunit#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g021870, MtrDRAFT_AC160516g44v2#GO:0003743#1F0P0C
Repeat List (scaffold210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20641.1	7	341	342	85.08	335	87	7e-172
Target_name	Start	End	Length	Cov(%)
sp\|D7U9M6_VITVI	2	336	337	99.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20641.1	12	341	342	79.82	330	83	1e-163
Target_name	Start	End	Length	Cov(%)
Os04t0376500-01	15	346	348	95.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold210	Augus-PASA	mRNA	143794	147492	.	+	.	ID=Dca20641.1;Parent=Dca20641
scaffold210	Augus-PASA	exon	143794	143803	.	+	.	ID=Dca20641.1.exon1;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	143941	144035	.	+	.	ID=Dca20641.1.exon2;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	144818	144934	.	+	.	ID=Dca20641.1.exon3;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	145198	145301	.	+	.	ID=Dca20641.1.exon4;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	145651	145717	.	+	.	ID=Dca20641.1.exon5;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	145981	146114	.	+	.	ID=Dca20641.1.exon6;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	146203	146251	.	+	.	ID=Dca20641.1.exon7;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	146373	146444	.	+	.	ID=Dca20641.1.exon8;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	146544	146645	.	+	.	ID=Dca20641.1.exon9;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	146769	146836	.	+	.	ID=Dca20641.1.exon10;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	147110	147262	.	+	.	ID=Dca20641.1.exon11;Parent=Dca20641.1
scaffold210	Augus-PASA	exon	147435	147492	.	+	.	ID=Dca20641.1.exon12;Parent=Dca20641.1