Carnation DB

Dca2065.1

Annotation

5-exons
f-1
sp|Q69FA4_PHAVU#Gag-pol polyprotein#Phaseolus vulgaris (Kidney bean) (French bean)#ORFNames=BA4#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1068)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2065.1	1	897	961	54.21	897	54	0
Target_name	Start	End	Length	Cov(%)
sp\|Q69FA4_PHAVU	354	1280	1290	71.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2065.1	1	368	961	11.65	368	30	3e-43
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	381	744	1401	25.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1068	Augustus	mRNA	53422	56937	.	+	.	ID=Dca2065.1;Parent=Dca2065
scaffold1068	Augustus	exon	53422	54521	.	+	.	ID=Dca2065.1.exon1;Parent=Dca2065.1
scaffold1068	Augustus	exon	54663	55363	.	+	.	ID=Dca2065.1.exon2;Parent=Dca2065.1
scaffold1068	Augustus	exon	55473	56356	.	+	.	ID=Dca2065.1.exon3;Parent=Dca2065.1
scaffold1068	Augustus	exon	56479	56601	.	+	.	ID=Dca2065.1.exon4;Parent=Dca2065.1
scaffold1068	Augustus	exon	56860	56937	.	+	.	ID=Dca2065.1.exon5;Parent=Dca2065.1