Carnation DB

Dca20666.1

Annotation

2-exons
f-1
sp|A9PFN5_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0031072;GO:0051082;GO:0006457#2F1P0C
AT4G13830.2 | Symbols: J20 | DNAJ-like 20 | chr4:8011518-8012577 FORWARD LENGTH=197
Repeat List (scaffold210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20666.1	39	188	191	52.35	150	66	9e-54
Target_name	Start	End	Length	Cov(%)
sp\|A9PFN5_POPTR	38	190	196	78.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20666.1	16	191	191	52.35	176	56	8e-50
Target_name	Start	End	Length	Cov(%)
AT4G13830.2	23	197	197	88.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold210	Augus-PASA	mRNA	311622	315334	.	-	.	ID=Dca20666.1;Parent=Dca20666
scaffold210	Augus-PASA	exon	311622	311762	.	-	.	ID=Dca20666.1.exon1;Parent=Dca20666.1
scaffold210	Augustus	exon	314900	315334	.	-	.	ID=Dca20666.1.exon2;Parent=Dca20666.1
scaffold210	Augus-PASA	mRNA	311622	313867	.	-	.	ID=Dca20666.2;Parent=Dca20666
scaffold210	Augus-PASA	exon	311622	311762	.	-	.	ID=Dca20666.2.exon1;Parent=Dca20666.2
scaffold210	Augus-PASA	exon	313433	313867	.	-	.	ID=Dca20666.2.exon2;Parent=Dca20666.2