Carnation DB

Dca20776.1

Annotation

11-exons
f-1
sp|B9HA67_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819077#GO:0016746#1F0P0C
AT3G57650.1 | Symbols: LPAT2 | lysophosphatidyl acyltransferase 2 | chr3:21349751-21352839 FORWARD LENGTH=389
Repeat List (scaffold211)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20776.1	1	288	347	48.99	288	54	1e-95
Target_name	Start	End	Length	Cov(%)
sp\|B9HA67_POPTR	3	315	385	81.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20776.1	22	274	347	44.38	253	56	1e-90
Target_name	Start	End	Length	Cov(%)
AT3G57650.1	27	305	389	71.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold211	Augustus	mRNA	127786	131883	.	+	.	ID=Dca20776.1;Parent=Dca20776
scaffold211	Augustus	exon	127786	127848	.	+	.	ID=Dca20776.1.exon1;Parent=Dca20776.1
scaffold211	Augustus	exon	128268	128390	.	+	.	ID=Dca20776.1.exon2;Parent=Dca20776.1
scaffold211	Augustus	exon	128484	128523	.	+	.	ID=Dca20776.1.exon3;Parent=Dca20776.1
scaffold211	Augustus	exon	128682	128755	.	+	.	ID=Dca20776.1.exon4;Parent=Dca20776.1
scaffold211	Augustus	exon	128968	129027	.	+	.	ID=Dca20776.1.exon5;Parent=Dca20776.1
scaffold211	Augustus	exon	129503	129661	.	+	.	ID=Dca20776.1.exon6;Parent=Dca20776.1
scaffold211	Augustus	exon	129765	129890	.	+	.	ID=Dca20776.1.exon7;Parent=Dca20776.1
scaffold211	Augustus	exon	130338	130430	.	+	.	ID=Dca20776.1.exon8;Parent=Dca20776.1
scaffold211	Augustus	exon	130508	130594	.	+	.	ID=Dca20776.1.exon9;Parent=Dca20776.1
scaffold211	Augustus	exon	131484	131568	.	+	.	ID=Dca20776.1.exon10;Parent=Dca20776.1
scaffold211	Augustus	exon	131750	131883	.	+	.	ID=Dca20776.1.exon11;Parent=Dca20776.1