Dca20804.1
Annotation
- 4-exons
- f-1
- sp|D7TQQ0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01430#unknown#0F0P0C
- AT5G03345.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:814196-815478 FORWARD LENGTH=104
- Repeat List (scaffold2113)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20804.1 |
1 |
105 |
106 |
78.3 |
105 |
80 |
8e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TQQ0_VITVI |
1 |
105 |
106 |
99.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20804.1 |
1 |
104 |
106 |
71.69 |
104 |
74 |
6e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G03345.1 |
1 |
104 |
104 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2113 |
Augus-PASA |
mRNA |
14393 |
19880 |
. |
+ |
. |
ID=Dca20804.1;Parent=Dca20804 |
| scaffold2113 |
Augus-PASA |
exon |
14393 |
14465 |
. |
+ |
. |
ID=Dca20804.1.exon1;Parent=Dca20804.1 |
| scaffold2113 |
Augus-PASA |
exon |
14569 |
14621 |
. |
+ |
. |
ID=Dca20804.1.exon2;Parent=Dca20804.1 |
| scaffold2113 |
Augus-PASA |
exon |
14766 |
14866 |
. |
+ |
. |
ID=Dca20804.1.exon3;Parent=Dca20804.1 |
| scaffold2113 |
Augus-PASA |
exon |
19787 |
19880 |
. |
+ |
. |
ID=Dca20804.1.exon4;Parent=Dca20804.1 |
