Dca20809.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2113)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20809.1 |
1 |
366 |
384 |
62.5 |
366 |
57 |
5e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
610 |
1033 |
1501 |
28.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca20809.1 |
2 |
306 |
384 |
36.45 |
305 |
40 |
1e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
641 |
996 |
1539 |
23.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2113 |
Augustus |
mRNA |
40164 |
41486 |
. |
+ |
. |
ID=Dca20809.1;Parent=Dca20809 |
| scaffold2113 |
Augustus |
exon |
40164 |
40199 |
. |
+ |
. |
ID=Dca20809.1.exon1;Parent=Dca20809.1 |
| scaffold2113 |
Augustus |
exon |
40308 |
40855 |
. |
+ |
. |
ID=Dca20809.1.exon2;Parent=Dca20809.1 |
| scaffold2113 |
Augustus |
exon |
40916 |
41486 |
. |
+ |
. |
ID=Dca20809.1.exon3;Parent=Dca20809.1 |
