Carnation DB

Dca20885.1

Annotation

8-exons
f-1
sp|B9HY66_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_725740#unknown#0F0P0C
Os07t0655900-01 SNARE associated Golgi protein domain containing protein.
Repeat List (scaffold212)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20885.1	12	239	242	63.63	228	58	1e-74
Target_name	Start	End	Length	Cov(%)
sp\|B9HY66_POPTR	8	271	275	96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20885.1	8	242	242	62.39	235	55	9e-73
Target_name	Start	End	Length	Cov(%)
Os07t0655900-01	4	269	270	98.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold212	Augustus	mRNA	112052	117639	.	-	.	ID=Dca20885.1;Parent=Dca20885
scaffold212	Augustus	exon	112052	112245	.	-	.	ID=Dca20885.1.exon1;Parent=Dca20885.1
scaffold212	Augustus	exon	112794	112824	.	-	.	ID=Dca20885.1.exon2;Parent=Dca20885.1
scaffold212	Augustus	exon	113395	113487	.	-	.	ID=Dca20885.1.exon3;Parent=Dca20885.1
scaffold212	Augustus	exon	114558	114644	.	-	.	ID=Dca20885.1.exon4;Parent=Dca20885.1
scaffold212	Augustus	exon	114799	114897	.	-	.	ID=Dca20885.1.exon5;Parent=Dca20885.1
scaffold212	Augustus	exon	114976	115030	.	-	.	ID=Dca20885.1.exon6;Parent=Dca20885.1
scaffold212	Augustus	exon	115539	115600	.	-	.	ID=Dca20885.1.exon7;Parent=Dca20885.1
scaffold212	Augustus	exon	117532	117639	.	-	.	ID=Dca20885.1.exon8;Parent=Dca20885.1