Carnation DB

Dca20886.1

Annotation

12-exons
f-1
sp|F6HQ68_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g00300#unknown#0F0P0C
Os05t0395300-01 Cystathionine beta-synthase, core domain containing protein.
Repeat List (scaffold212)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20886.1	1	456	474	71.09	456	70	6e-180
Target_name	Start	End	Length	Cov(%)
sp\|F6HQ68_VITVI	1	486	504	96.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20886.1	8	442	474	70.04	435	72	2e-174
Target_name	Start	End	Length	Cov(%)
Os05t0395300-01	10	465	501	91.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold212	Augustus	mRNA	123452	128089	.	+	.	ID=Dca20886.1;Parent=Dca20886
scaffold212	Augustus	exon	123452	123689	.	+	.	ID=Dca20886.1.exon1;Parent=Dca20886.1
scaffold212	Augustus	exon	125178	125254	.	+	.	ID=Dca20886.1.exon2;Parent=Dca20886.1
scaffold212	Augustus	exon	125336	125419	.	+	.	ID=Dca20886.1.exon3;Parent=Dca20886.1
scaffold212	Augustus	exon	125503	125616	.	+	.	ID=Dca20886.1.exon4;Parent=Dca20886.1
scaffold212	Augustus	exon	126133	126204	.	+	.	ID=Dca20886.1.exon5;Parent=Dca20886.1
scaffold212	Augustus	exon	126296	126363	.	+	.	ID=Dca20886.1.exon6;Parent=Dca20886.1
scaffold212	Augustus	exon	126451	126538	.	+	.	ID=Dca20886.1.exon7;Parent=Dca20886.1
scaffold212	Augustus	exon	126625	126698	.	+	.	ID=Dca20886.1.exon8;Parent=Dca20886.1
scaffold212	Augustus	exon	126779	127151	.	+	.	ID=Dca20886.1.exon9;Parent=Dca20886.1
scaffold212	Augustus	exon	127365	127411	.	+	.	ID=Dca20886.1.exon10;Parent=Dca20886.1
scaffold212	Augustus	exon	127507	127585	.	+	.	ID=Dca20886.1.exon11;Parent=Dca20886.1
scaffold212	Augustus	exon	127979	128089	.	+	.	ID=Dca20886.1.exon12;Parent=Dca20886.1