Carnation DB

Dca20975.1

Annotation

6-exons
f-1
sp|B9T757_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0414400#GO:0005622;GO:0005097#1F0P1C
AT2G43490.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr2:18055106-18058179 REVERSE LENGTH=745
Repeat List (scaffold2128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20975.1	28	465	467	58.24	438	61	6e-151
Target_name	Start	End	Length	Cov(%)
sp\|B9T757_RICCO	8	448	662	66.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca20975.1	29	466	467	52.03	438	54	3e-128
Target_name	Start	End	Length	Cov(%)
AT2G43490.1	8	433	745	57.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2128	Augustus	mRNA	23543	28480	.	+	.	ID=Dca20975.1;Parent=Dca20975
scaffold2128	Augustus	exon	23543	23737	.	+	.	ID=Dca20975.1.exon1;Parent=Dca20975.1
scaffold2128	Augustus	exon	25763	25861	.	+	.	ID=Dca20975.1.exon2;Parent=Dca20975.1
scaffold2128	Augustus	exon	26936	27039	.	+	.	ID=Dca20975.1.exon3;Parent=Dca20975.1
scaffold2128	Augustus	exon	27120	27907	.	+	.	ID=Dca20975.1.exon4;Parent=Dca20975.1
scaffold2128	Augustus	exon	28025	28147	.	+	.	ID=Dca20975.1.exon5;Parent=Dca20975.1
scaffold2128	Augustus	exon	28386	28480	.	+	.	ID=Dca20975.1.exon6;Parent=Dca20975.1