Carnation DB

Dca21159.1

Annotation

7-exons
f-1
sp|A9PGP1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_565403#unknown#0F0P0C
Os04t0465000-01 Sterile alpha motif SAM domain containing protein.
Repeat List (scaffold2144)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21159.1	68	398	401	34.41	331	39	8e-45
Target_name	Start	End	Length	Cov(%)
sp\|A9PGP1_POPTR	19	327	330	93.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21159.1	87	400	401	29.67	314	35	4e-30
Target_name	Start	End	Length	Cov(%)
Os04t0465000-01	40	345	347	88.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2144	Augustus	mRNA	78517	83528	.	-	.	ID=Dca21159.1;Parent=Dca21159
scaffold2144	Augustus	exon	78517	78573	.	-	.	ID=Dca21159.1.exon1;Parent=Dca21159.1
scaffold2144	Augustus	exon	79382	79444	.	-	.	ID=Dca21159.1.exon2;Parent=Dca21159.1
scaffold2144	Augustus	exon	80842	80922	.	-	.	ID=Dca21159.1.exon3;Parent=Dca21159.1
scaffold2144	Augustus	exon	81340	82034	.	-	.	ID=Dca21159.1.exon4;Parent=Dca21159.1
scaffold2144	Augustus	exon	82529	82637	.	-	.	ID=Dca21159.1.exon5;Parent=Dca21159.1
scaffold2144	Augustus	exon	82760	82869	.	-	.	ID=Dca21159.1.exon6;Parent=Dca21159.1
scaffold2144	Augustus	exon	83438	83528	.	-	.	ID=Dca21159.1.exon7;Parent=Dca21159.1