Dca2131.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold107)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2131.1 |
1 |
469 |
479 |
55.53 |
469 |
54 |
1e-146
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
944 |
1440 |
1499 |
33.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2131.1 |
2 |
459 |
479 |
39.87 |
458 |
40 |
8e-102
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
930 |
1411 |
1539 |
31.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold107 |
Augustus |
mRNA |
263143 |
264663 |
. |
+ |
. |
ID=Dca2131.1;Parent=Dca2131 |
| scaffold107 |
Augustus |
exon |
263143 |
263373 |
. |
+ |
. |
ID=Dca2131.1.exon1;Parent=Dca2131.1 |
| scaffold107 |
Augustus |
exon |
263455 |
264663 |
. |
+ |
. |
ID=Dca2131.1.exon2;Parent=Dca2131.1 |
