Carnation DB

Dca21382.1

Annotation

5-exons
f-1
sp|C6JRX9_SORBI#Putative uncharacterized protein Sb0013s009070#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb0013s009070#GO:0003676;GO:0015074#1F1P0C
sp|Q688L2_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=P0636E04.8#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold2162)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21382.1	118	288	470	21.91	171	61	1e-52
Target_name	Start	End	Length	Cov(%)
sp\|C6JRX9_SORBI	377	547	1219	14.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21382.1	118	286	470	15.1	169	42	7e-31
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	197	369	1262	13.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2162	Augustus	mRNA	872	3860	.	-	.	ID=Dca21382.1;Parent=Dca21382
scaffold2162	Augustus	exon	872	1116	.	-	.	ID=Dca21382.1.exon1;Parent=Dca21382.1
scaffold2162	Augustus	exon	1346	1576	.	-	.	ID=Dca21382.1.exon2;Parent=Dca21382.1
scaffold2162	Augustus	exon	2420	2466	.	-	.	ID=Dca21382.1.exon3;Parent=Dca21382.1
scaffold2162	Augustus	exon	2554	3088	.	-	.	ID=Dca21382.1.exon4;Parent=Dca21382.1
scaffold2162	Augustus	exon	3506	3860	.	-	.	ID=Dca21382.1.exon5;Parent=Dca21382.1