Dca21546.1
Annotation
- 3-exons
- f-1
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold2175)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21546.1 |
60 |
295 |
305 |
55.4 |
236 |
72 |
3e-94
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B5U9F7_SOYBN |
1 |
232 |
1321 |
17.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21546.1 |
49 |
222 |
305 |
25.9 |
174 |
44 |
2e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0375717-00 |
4 |
183 |
189 |
95.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2175 |
Augustus |
mRNA |
53293 |
55755 |
. |
+ |
. |
ID=Dca21546.1;Parent=Dca21546 |
| scaffold2175 |
Augustus |
exon |
53293 |
53365 |
. |
+ |
. |
ID=Dca21546.1.exon1;Parent=Dca21546.1 |
| scaffold2175 |
Augustus |
exon |
54804 |
55613 |
. |
+ |
. |
ID=Dca21546.1.exon2;Parent=Dca21546.1 |
| scaffold2175 |
Augustus |
exon |
55721 |
55755 |
. |
+ |
. |
ID=Dca21546.1.exon3;Parent=Dca21546.1 |
