Dca21858.1
Annotation
- 4-exons
- f-1
- sp|B9I704_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_662619#GO:0006950#0F1P0C
- Os01t0303800-02 UspA domain containing protein.
- Repeat List (scaffold22)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21858.1 |
1 |
174 |
195 |
44.1 |
174 |
49 |
6e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I704_POPTR |
1 |
168 |
171 |
98.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21858.1 |
11 |
170 |
195 |
40.51 |
160 |
50 |
1e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0303800-02 |
31 |
181 |
183 |
82.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold22 |
Augustus |
mRNA |
385320 |
386557 |
. |
+ |
. |
ID=Dca21858.1;Parent=Dca21858 |
| scaffold22 |
Augustus |
exon |
385320 |
385533 |
. |
+ |
. |
ID=Dca21858.1.exon1;Parent=Dca21858.1 |
| scaffold22 |
Augustus |
exon |
385981 |
386084 |
. |
+ |
. |
ID=Dca21858.1.exon2;Parent=Dca21858.1 |
| scaffold22 |
Augustus |
exon |
386191 |
386309 |
. |
+ |
. |
ID=Dca21858.1.exon3;Parent=Dca21858.1 |
| scaffold22 |
Augustus |
exon |
386407 |
386557 |
. |
+ |
. |
ID=Dca21858.1.exon4;Parent=Dca21858.1 |
