Carnation DB

Dca22018.1

Annotation

18-exons
f-1
sp|D7TH25_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02840#unknown#0F0P0C
AT3G11560.2 | Symbols: | LETM1-like protein | chr3:3639553-3645506 FORWARD LENGTH=872
Repeat List (scaffold2213)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22018.1	4	914	914	57.33	911	57	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TH25_VITVI	5	908	910	99.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22018.1	48	904	914	52.84	857	56	0
Target_name	Start	End	Length	Cov(%)
AT3G11560.2	41	859	872	93.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2213	Augustus	mRNA	30746	39050	.	+	.	ID=Dca22018.1;Parent=Dca22018
scaffold2213	Augustus	exon	30746	31264	.	+	.	ID=Dca22018.1.exon1;Parent=Dca22018.1
scaffold2213	Augustus	exon	31990	32081	.	+	.	ID=Dca22018.1.exon2;Parent=Dca22018.1
scaffold2213	Augustus	exon	32799	32957	.	+	.	ID=Dca22018.1.exon3;Parent=Dca22018.1
scaffold2213	Augustus	exon	33062	33455	.	+	.	ID=Dca22018.1.exon4;Parent=Dca22018.1
scaffold2213	Augustus	exon	34163	34281	.	+	.	ID=Dca22018.1.exon5;Parent=Dca22018.1
scaffold2213	Augustus	exon	34470	34538	.	+	.	ID=Dca22018.1.exon6;Parent=Dca22018.1
scaffold2213	Augustus	exon	34638	34710	.	+	.	ID=Dca22018.1.exon7;Parent=Dca22018.1
scaffold2213	Augus-PASA	exon	34790	35010	.	+	.	ID=Dca22018.1.exon8;Parent=Dca22018.1
scaffold2213	Augus-PASA	exon	35128	35172	.	+	.	ID=Dca22018.1.exon9;Parent=Dca22018.1
scaffold2213	Augus-PASA	exon	35408	35489	.	+	.	ID=Dca22018.1.exon10;Parent=Dca22018.1
scaffold2213	Augus-PASA	exon	35783	35974	.	+	.	ID=Dca22018.1.exon11;Parent=Dca22018.1
scaffold2213	Augus-PASA	exon	36829	36926	.	+	.	ID=Dca22018.1.exon12;Parent=Dca22018.1
scaffold2213	Augus-PASA	exon	37060	37144	.	+	.	ID=Dca22018.1.exon13;Parent=Dca22018.1
scaffold2213	Augustus	exon	37398	37550	.	+	.	ID=Dca22018.1.exon14;Parent=Dca22018.1
scaffold2213	Augustus	exon	37739	37843	.	+	.	ID=Dca22018.1.exon15;Parent=Dca22018.1
scaffold2213	Augustus	exon	38380	38550	.	+	.	ID=Dca22018.1.exon16;Parent=Dca22018.1
scaffold2213	Augustus	exon	38799	38858	.	+	.	ID=Dca22018.1.exon17;Parent=Dca22018.1
scaffold2213	Augustus	exon	38943	39050	.	+	.	ID=Dca22018.1.exon18;Parent=Dca22018.1