Carnation DB

Dca22079.1

Annotation

5-exons
f-1
sp|B9N8Z3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_786585#unknown#0F0P0C
sp|H6VVZ3_AQUCA#VRN5-like protein#Aquilegia caerulea (Rocky mountain columbine)#unknown#unknown#0F0P0C
Repeat List (scaffold2219)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22079.1	117	156	297	9.09	40	60	2e-06
Target_name	Start	End	Length	Cov(%)
sp\|B9N8Z3_POPTR	84	128	612	7.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22079.1	143	273	297	20.2	131	44	2e-22
Target_name	Start	End	Length	Cov(%)
Os12t0533500-01	299	435	708	19.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2219	Augustus	mRNA	47555	50454	.	+	.	ID=Dca22079.1;Parent=Dca22079
scaffold2219	Augustus	exon	47555	47728	.	+	.	ID=Dca22079.1.exon1;Parent=Dca22079.1
scaffold2219	Augustus	exon	48431	48515	.	+	.	ID=Dca22079.1.exon2;Parent=Dca22079.1
scaffold2219	Augustus	exon	49300	49477	.	+	.	ID=Dca22079.1.exon3;Parent=Dca22079.1
scaffold2219	Augustus	exon	49897	49997	.	+	.	ID=Dca22079.1.exon4;Parent=Dca22079.1
scaffold2219	Augustus	exon	50099	50454	.	+	.	ID=Dca22079.1.exon5;Parent=Dca22079.1