Dca22158.1
Annotation
- 3-exons
- f-1
- sp|F6I5J4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0171g00050#unknown#0F0P0C
- Os12t0273900-00 Leucine-rich repeat domain containing protein.
- Repeat List (scaffold2225)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22158.1 |
115 |
191 |
195 |
22.05 |
77 |
54 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6I5J4_VITVI |
49 |
126 |
988 |
7.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22158.1 |
22 |
79 |
195 |
11.28 |
58 |
38 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0120300-01 |
752 |
809 |
823 |
7.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2225 |
Augustus |
mRNA |
2780 |
4179 |
. |
- |
. |
ID=Dca22158.1;Parent=Dca22158 |
| scaffold2225 |
Augustus |
exon |
2780 |
3022 |
. |
- |
. |
ID=Dca22158.1.exon1;Parent=Dca22158.1 |
| scaffold2225 |
Augustus |
exon |
3384 |
3485 |
. |
- |
. |
ID=Dca22158.1.exon2;Parent=Dca22158.1 |
| scaffold2225 |
Augustus |
exon |
3937 |
4179 |
. |
- |
. |
ID=Dca22158.1.exon3;Parent=Dca22158.1 |
