Dca22189.1
Annotation
- 4-exons
- f-1
- sp|A5BSJ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_008285#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold2229)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22189.1 |
2 |
55 |
97 |
34.02 |
54 |
62 |
9e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G4XHD7_POSOC |
23 |
76 |
160 |
33.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22189.1 |
392 |
620 |
846 |
9.45 |
229 |
35 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
579 |
802 |
1539 |
14.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2229 |
Augustus |
mRNA |
13362 |
16531 |
. |
+ |
. |
ID=Dca22189.1;Parent=Dca22189 |
| scaffold2229 |
Augustus |
exon |
13362 |
14286 |
. |
+ |
. |
ID=Dca22189.1.exon1;Parent=Dca22189.1 |
| scaffold2229 |
Augustus |
exon |
14485 |
14693 |
. |
+ |
. |
ID=Dca22189.1.exon2;Parent=Dca22189.1 |
| scaffold2229 |
Augustus |
exon |
14997 |
15680 |
. |
+ |
. |
ID=Dca22189.1.exon3;Parent=Dca22189.1 |
| scaffold2229 |
Augustus |
exon |
15809 |
16531 |
. |
+ |
. |
ID=Dca22189.1.exon4;Parent=Dca22189.1 |
