Dca22279.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2236)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22279.1 |
1 |
160 |
167 |
65.26 |
160 |
57 |
2e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
682 |
873 |
896 |
21.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22279.1 |
20 |
159 |
167 |
28.74 |
140 |
35 |
5e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1235 |
1372 |
1401 |
9.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2236 |
Augustus |
mRNA |
44812 |
45413 |
. |
- |
. |
ID=Dca22279.1;Parent=Dca22279 |
| scaffold2236 |
Augustus |
exon |
44812 |
45256 |
. |
- |
. |
ID=Dca22279.1.exon1;Parent=Dca22279.1 |
| scaffold2236 |
Augustus |
exon |
45355 |
45413 |
. |
- |
. |
ID=Dca22279.1.exon2;Parent=Dca22279.1 |
