Carnation DB

Dca2241.1

Annotation

6-exons
f-1
sp|B9HQK7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_875527#GO:0008270;GO:0035556#1F1P0C
AT5G22760.1 | Symbols: | PHD finger family protein | chr5:7571635-7577662 FORWARD LENGTH=1566
Repeat List (scaffold1075)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2241.1	233	1158	1159	36.84	926	43	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HQK7_POPTR	635	1603	1604	60.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2241.1	6	130	1159	3.79	125	35	5e-10
Target_name	Start	End	Length	Cov(%)
AT5G22760.1	497	612	1566	7.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1075	Augustus	mRNA	25160	30307	.	+	.	ID=Dca2241.1;Parent=Dca2241
scaffold1075	Augustus	exon	25160	26398	.	+	.	ID=Dca2241.1.exon1;Parent=Dca2241.1
scaffold1075	Augustus	exon	26856	27138	.	+	.	ID=Dca2241.1.exon2;Parent=Dca2241.1
scaffold1075	Augustus	exon	27362	27486	.	+	.	ID=Dca2241.1.exon3;Parent=Dca2241.1
scaffold1075	Augustus	exon	27582	27984	.	+	.	ID=Dca2241.1.exon4;Parent=Dca2241.1
scaffold1075	Augustus	exon	28789	29328	.	+	.	ID=Dca2241.1.exon5;Parent=Dca2241.1
scaffold1075	Augustus	exon	29418	30307	.	+	.	ID=Dca2241.1.exon6;Parent=Dca2241.1