Carnation DB

Dca22456.1

Annotation

7-exons
f-1
sp|A5AM50_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_036418#GO:0003824#1F0P0C
Os01t0737800-02 Similar to Protein farnesyltransferase beta subunit (EC 2.5.1.58) (CAAX farnesyltransferase beta subunit) (RAS proteins prenyltransferase beta) (FTase-beta).
Repeat List (scaffold2250)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22456.1	29	184	211	40.75	156	45	4e-35
Target_name	Start	End	Length	Cov(%)
sp\|A5AM50_VITVI	159	342	697	26.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22456.1	29	180	211	33.17	152	42	1e-27
Target_name	Start	End	Length	Cov(%)
Os01t0737800-02	232	401	479	35.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2250	Augustus	mRNA	25572	31013	.	-	.	ID=Dca22456.1;Parent=Dca22456
scaffold2250	Augustus	exon	25572	25667	.	-	.	ID=Dca22456.1.exon1;Parent=Dca22456.1
scaffold2250	Augustus	exon	26798	26925	.	-	.	ID=Dca22456.1.exon2;Parent=Dca22456.1
scaffold2250	Augustus	exon	27229	27361	.	-	.	ID=Dca22456.1.exon3;Parent=Dca22456.1
scaffold2250	Augustus	exon	28162	28234	.	-	.	ID=Dca22456.1.exon4;Parent=Dca22456.1
scaffold2250	Augustus	exon	28336	28392	.	-	.	ID=Dca22456.1.exon5;Parent=Dca22456.1
scaffold2250	Augustus	exon	28537	28601	.	-	.	ID=Dca22456.1.exon6;Parent=Dca22456.1
scaffold2250	Augustus	exon	30930	31013	.	-	.	ID=Dca22456.1.exon7;Parent=Dca22456.1