Carnation DB

Dca22540.1

Annotation

5-exons
f-1
sp|G5DWP4_SILLA#60S ribosomal protein L24-1#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold226)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22540.1	1	138	163	82.2	138	98	4e-72
Target_name	Start	End	Length	Cov(%)
sp\|G5DWP4_SILLA	1	138	163	84.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22540.1	1	156	163	77.91	156	81	2e-63
Target_name	Start	End	Length	Cov(%)
AT2G36620.1	1	157	164	95.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold226	Augustus	mRNA	82105	84144	.	-	.	ID=Dca22540.1;Parent=Dca22540
scaffold226	Augustus	exon	82105	82258	.	-	.	ID=Dca22540.1.exon1;Parent=Dca22540.1
scaffold226	Augustus	exon	82345	82493	.	-	.	ID=Dca22540.1.exon2;Parent=Dca22540.1
scaffold226	Augustus	exon	82597	82698	.	-	.	ID=Dca22540.1.exon3;Parent=Dca22540.1
scaffold226	Augustus	exon	82803	82878	.	-	.	ID=Dca22540.1.exon4;Parent=Dca22540.1
scaffold226	Augustus	exon	84134	84144	.	-	.	ID=Dca22540.1.exon5;Parent=Dca22540.1