Carnation DB

Dca22596.1

Annotation

20-exons
f-1
sp|D7T8L4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g05710#GO:0005488#1F0P0C
Os03t0223700-01 Armadillo-like helical domain containing protein.
Repeat List (scaffold2264)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22596.1	3	722	725	79.72	720	80	0
Target_name	Start	End	Length	Cov(%)
sp\|D7T8L4_VITVI	2	724	727	99.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22596.1	1	698	725	74.62	698	78	0
Target_name	Start	End	Length	Cov(%)
AT2G01690.2	1	697	744	93.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2264	Augustus	mRNA	12988	23104	.	-	.	ID=Dca22596.1;Parent=Dca22596
scaffold2264	Augustus	exon	12988	13092	.	-	.	ID=Dca22596.1.exon1;Parent=Dca22596.1
scaffold2264	Augustus	exon	14083	14376	.	-	.	ID=Dca22596.1.exon2;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	14945	15013	.	-	.	ID=Dca22596.1.exon3;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	17345	17473	.	-	.	ID=Dca22596.1.exon4;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	17554	17715	.	-	.	ID=Dca22596.1.exon5;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	18592	18712	.	-	.	ID=Dca22596.1.exon6;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	18855	18970	.	-	.	ID=Dca22596.1.exon7;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	19323	19388	.	-	.	ID=Dca22596.1.exon8;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	20113	20194	.	-	.	ID=Dca22596.1.exon9;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	20394	20485	.	-	.	ID=Dca22596.1.exon10;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	20565	20672	.	-	.	ID=Dca22596.1.exon11;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	20842	20928	.	-	.	ID=Dca22596.1.exon12;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	21056	21150	.	-	.	ID=Dca22596.1.exon13;Parent=Dca22596.1
scaffold2264	Augus-PASA	exon	21237	21379	.	-	.	ID=Dca22596.1.exon14;Parent=Dca22596.1
scaffold2264	Augustus	exon	21463	21491	.	-	.	ID=Dca22596.1.exon15;Parent=Dca22596.1
scaffold2264	Augustus	exon	21574	21693	.	-	.	ID=Dca22596.1.exon16;Parent=Dca22596.1
scaffold2264	Augustus	exon	21770	21859	.	-	.	ID=Dca22596.1.exon17;Parent=Dca22596.1
scaffold2264	Augustus	exon	22667	22732	.	-	.	ID=Dca22596.1.exon18;Parent=Dca22596.1
scaffold2264	Augustus	exon	22815	22928	.	-	.	ID=Dca22596.1.exon19;Parent=Dca22596.1
scaffold2264	Augustus	exon	23015	23104	.	-	.	ID=Dca22596.1.exon20;Parent=Dca22596.1