Dca22609.1
Annotation
- 3-exons
- f-1
- sp|A9PA40_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0030132;GO:0030130;GO:0005198;GO:0006886;GO:0016192#1F2P2C
- AT3G51890.1 | Symbols: | Clathrin light chain protein | chr3:19249686-19250890 REVERSE LENGTH=258
- Repeat List (scaffold2266)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22609.1 |
14 |
236 |
240 |
59.16 |
223 |
56 |
1e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PA40_POPTR |
47 |
297 |
326 |
76.99 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22609.1 |
57 |
225 |
240 |
45 |
169 |
64 |
8e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G51890.1 |
96 |
254 |
258 |
61.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2266 |
Augustus |
mRNA |
5688 |
8143 |
. |
- |
. |
ID=Dca22609.1;Parent=Dca22609 |
| scaffold2266 |
Augustus |
exon |
5688 |
6059 |
. |
- |
. |
ID=Dca22609.1.exon1;Parent=Dca22609.1 |
| scaffold2266 |
Augustus |
exon |
6136 |
6289 |
. |
- |
. |
ID=Dca22609.1.exon2;Parent=Dca22609.1 |
| scaffold2266 |
Augustus |
exon |
7947 |
8143 |
. |
- |
. |
ID=Dca22609.1.exon3;Parent=Dca22609.1 |
