Dca22622.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold22679)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22622.1 |
149 |
251 |
252 |
21.03 |
103 |
52 |
5e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
412 |
514 |
964 |
10.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22622.1 |
162 |
251 |
252 |
13.49 |
90 |
38 |
7e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
872 |
958 |
1401 |
6.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold22679 |
Augustus |
mRNA |
1 |
1815 |
. |
- |
. |
ID=Dca22622.1;Parent=Dca22622 |
| scaffold22679 |
Augustus |
exon |
1 |
360 |
. |
- |
. |
ID=Dca22622.1.exon1;Parent=Dca22622.1 |
| scaffold22679 |
Augustus |
exon |
1419 |
1815 |
. |
- |
. |
ID=Dca22622.1.exon2;Parent=Dca22622.1 |
