Carnation DB

Dca22633.1

Annotation

18-exons
f-1
sp|B9H8R9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_761975#GO:0005524;GO:0017111#2F0P0C
AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 | chr3:20993869-20998531 REVERSE LENGTH=1022
Repeat List (scaffold2269)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22633.1	439	1317	1356	39.67	879	58	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H8R9_POPTR	126	1026	1042	86.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22633.1	406	1340	1356	37.61	935	52	0
Target_name	Start	End	Length	Cov(%)
AT3G56690.1	88	1012	1022	90.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2269	Augustus	mRNA	12976	23258	.	+	.	ID=Dca22633.1;Parent=Dca22633
scaffold2269	Augustus	exon	12976	13012	.	+	.	ID=Dca22633.1.exon1;Parent=Dca22633.1
scaffold2269	Augustus	exon	13576	13714	.	+	.	ID=Dca22633.1.exon2;Parent=Dca22633.1
scaffold2269	Augustus	exon	13820	14120	.	+	.	ID=Dca22633.1.exon3;Parent=Dca22633.1
scaffold2269	Augustus	exon	14224	14324	.	+	.	ID=Dca22633.1.exon4;Parent=Dca22633.1
scaffold2269	Augustus	exon	14455	14692	.	+	.	ID=Dca22633.1.exon5;Parent=Dca22633.1
scaffold2269	Augustus	exon	14780	14938	.	+	.	ID=Dca22633.1.exon6;Parent=Dca22633.1
scaffold2269	Augustus	exon	15029	15207	.	+	.	ID=Dca22633.1.exon7;Parent=Dca22633.1
scaffold2269	Augustus	exon	15293	15389	.	+	.	ID=Dca22633.1.exon8;Parent=Dca22633.1
scaffold2269	Augustus	exon	17870	18028	.	+	.	ID=Dca22633.1.exon9;Parent=Dca22633.1
scaffold2269	Augustus	exon	18544	19397	.	+	.	ID=Dca22633.1.exon10;Parent=Dca22633.1
scaffold2269	Augustus	exon	19858	20137	.	+	.	ID=Dca22633.1.exon11;Parent=Dca22633.1
scaffold2269	Augustus	exon	20408	20615	.	+	.	ID=Dca22633.1.exon12;Parent=Dca22633.1
scaffold2269	Augustus	exon	20808	21169	.	+	.	ID=Dca22633.1.exon13;Parent=Dca22633.1
scaffold2269	Augustus	exon	21372	21798	.	+	.	ID=Dca22633.1.exon14;Parent=Dca22633.1
scaffold2269	Augus-PASA	exon	21880	21960	.	+	.	ID=Dca22633.1.exon15;Parent=Dca22633.1
scaffold2269	Augus-PASA	exon	22050	22240	.	+	.	ID=Dca22633.1.exon16;Parent=Dca22633.1
scaffold2269	Augus-PASA	exon	22329	22516	.	+	.	ID=Dca22633.1.exon17;Parent=Dca22633.1
scaffold2269	Augus-PASA	exon	23189	23258	.	+	.	ID=Dca22633.1.exon18;Parent=Dca22633.1