Carnation DB

Dca22773.1

Annotation

10-exons
f-1
sp|F6H383_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g00650#GO:0005622;GO:0008408;GO:0003723#2F0P1C
AT2G25910.2 | Symbols: | 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein | chr2:11049379-11051997 REVERSE LENGTH=342
Repeat List (scaffold228)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22773.1	1	337	337	81.3	337	81	1e-158
Target_name	Start	End	Length	Cov(%)
sp\|F6H383_VITVI	29	368	369	92.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22773.1	1	336	337	75.07	336	75	5e-147
Target_name	Start	End	Length	Cov(%)
AT2G25910.2	1	341	342	99.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold228	Augus-PASA	mRNA	152498	157567	.	-	.	ID=Dca22773.1;Parent=Dca22773
scaffold228	Augus-PASA	exon	152498	152572	.	-	.	ID=Dca22773.1.exon1;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	152719	152761	.	-	.	ID=Dca22773.1.exon2;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	152863	152992	.	-	.	ID=Dca22773.1.exon3;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	153267	153483	.	-	.	ID=Dca22773.1.exon4;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	153732	153778	.	-	.	ID=Dca22773.1.exon5;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	154570	154666	.	-	.	ID=Dca22773.1.exon6;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	154917	154967	.	-	.	ID=Dca22773.1.exon7;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	155083	155214	.	-	.	ID=Dca22773.1.exon8;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	155391	155557	.	-	.	ID=Dca22773.1.exon9;Parent=Dca22773.1
scaffold228	Augus-PASA	exon	157513	157567	.	-	.	ID=Dca22773.1.exon10;Parent=Dca22773.1