Dca22796.1
Annotation
- 4-exons
- f-1
- sp|D7T7D9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g00370#unknown#0F0P0C
- AT3G05070.1 | Symbols: | CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). | chr3:1416480-1417533 FORWARD LENGTH=144
- Repeat List (scaffold2281)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22796.1 |
1 |
142 |
146 |
67.12 |
142 |
69 |
7e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7T7D9_VITVI |
1 |
144 |
149 |
96.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22796.1 |
1 |
139 |
146 |
58.21 |
139 |
61 |
6e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G05070.1 |
1 |
136 |
144 |
94.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2281 |
Augus-PASA |
mRNA |
39717 |
43103 |
. |
- |
. |
ID=Dca22796.1;Parent=Dca22796 |
| scaffold2281 |
Augus-PASA |
exon |
39717 |
39772 |
. |
- |
. |
ID=Dca22796.1.exon1;Parent=Dca22796.1 |
| scaffold2281 |
Augus-PASA |
exon |
41113 |
41227 |
. |
- |
. |
ID=Dca22796.1.exon2;Parent=Dca22796.1 |
| scaffold2281 |
Augus-PASA |
exon |
41388 |
41517 |
. |
- |
. |
ID=Dca22796.1.exon3;Parent=Dca22796.1 |
| scaffold2281 |
Augustus |
exon |
42964 |
43103 |
. |
- |
. |
ID=Dca22796.1.exon4;Parent=Dca22796.1 |
