Carnation DB

Dca22819.1

Annotation

10-exons
f-1
sp|B9GF79_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1067453#unknown#0F0P0C
AT1G15200.3 | Symbols: | protein-protein interaction regulator family protein | chr1:5228477-5231017 REVERSE LENGTH=470
Repeat List (scaffold2285)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22819.1	2	389	406	58.86	388	60	2e-124
Target_name	Start	End	Length	Cov(%)
sp\|B9GF79_POPTR	3	398	415	95.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22819.1	1	382	406	59.6	382	55	3e-107
Target_name	Start	End	Length	Cov(%)
AT1G15200.3	1	439	470	93.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2285	Augustus	mRNA	36047	41228	.	-	.	ID=Dca22819.1;Parent=Dca22819
scaffold2285	Augustus	exon	36047	36415	.	-	.	ID=Dca22819.1.exon1;Parent=Dca22819.1
scaffold2285	Augustus	exon	37286	37370	.	-	.	ID=Dca22819.1.exon2;Parent=Dca22819.1
scaffold2285	Augustus	exon	37663	37763	.	-	.	ID=Dca22819.1.exon3;Parent=Dca22819.1
scaffold2285	Augustus	exon	37865	37948	.	-	.	ID=Dca22819.1.exon4;Parent=Dca22819.1
scaffold2285	Augustus	exon	38481	38552	.	-	.	ID=Dca22819.1.exon5;Parent=Dca22819.1
scaffold2285	Augustus	exon	39576	39686	.	-	.	ID=Dca22819.1.exon6;Parent=Dca22819.1
scaffold2285	Augustus	exon	39787	39939	.	-	.	ID=Dca22819.1.exon7;Parent=Dca22819.1
scaffold2285	Augustus	exon	40044	40109	.	-	.	ID=Dca22819.1.exon8;Parent=Dca22819.1
scaffold2285	Augustus	exon	40967	41068	.	-	.	ID=Dca22819.1.exon9;Parent=Dca22819.1
scaffold2285	Augustus	exon	41151	41228	.	-	.	ID=Dca22819.1.exon10;Parent=Dca22819.1