Carnation DB

Dca22988.1

Annotation

9-exons
f-1
sp|B9HKH1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_721099#GO:0008270#1F0P0C
AT3G23280.1 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis thaliana | chr3:8321588-8324109 FORWARD LENGTH=462
Repeat List (scaffold23)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22988.1	1	411	411	46.95	411	44	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9HKH1_POPTR	1	442	442	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22988.1	1	411	411	44.76	411	40	1e-79
Target_name	Start	End	Length	Cov(%)
AT3G23280.1	1	462	462	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold23	Augustus	mRNA	46456	49060	.	+	.	ID=Dca22988.1;Parent=Dca22988
scaffold23	Augustus	exon	46456	46557	.	+	.	ID=Dca22988.1.exon1;Parent=Dca22988.1
scaffold23	Augustus	exon	47137	47251	.	+	.	ID=Dca22988.1.exon2;Parent=Dca22988.1
scaffold23	Augustus	exon	47447	47527	.	+	.	ID=Dca22988.1.exon3;Parent=Dca22988.1
scaffold23	Augustus	exon	47631	47719	.	+	.	ID=Dca22988.1.exon4;Parent=Dca22988.1
scaffold23	Augustus	exon	47805	47896	.	+	.	ID=Dca22988.1.exon5;Parent=Dca22988.1
scaffold23	Augustus	exon	47977	48058	.	+	.	ID=Dca22988.1.exon6;Parent=Dca22988.1
scaffold23	Augustus	exon	48184	48286	.	+	.	ID=Dca22988.1.exon7;Parent=Dca22988.1
scaffold23	Augustus	exon	48381	48466	.	+	.	ID=Dca22988.1.exon8;Parent=Dca22988.1
scaffold23	Augustus	exon	48575	49060	.	+	.	ID=Dca22988.1.exon9;Parent=Dca22988.1