Dca23117.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2305)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23117.1 |
24 |
139 |
143 |
51.74 |
116 |
64 |
8e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
780 |
895 |
896 |
12.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23117.1 |
22 |
126 |
143 |
28.67 |
105 |
40 |
3e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1280 |
1382 |
1401 |
7.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2305 |
Augustus |
mRNA |
7775 |
8433 |
. |
+ |
. |
ID=Dca23117.1;Parent=Dca23117 |
| scaffold2305 |
Augustus |
exon |
7775 |
7834 |
. |
+ |
. |
ID=Dca23117.1.exon1;Parent=Dca23117.1 |
| scaffold2305 |
Augustus |
exon |
8062 |
8433 |
. |
+ |
. |
ID=Dca23117.1.exon2;Parent=Dca23117.1 |
