Carnation DB

Dca23254.1

Annotation

18-exons
f-1
sp|B9SLQ7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0530670#GO:0031227;GO:0016788;GO:0006505;GO:0006886#1F2P1C
Os09t0266400-01 PGAP1-like family protein.
Repeat List (scaffold232)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23254.1	1	1070	1070	62.42	1070	60	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SLQ7_RICCO	1	1110	1110	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23254.1	5	1070	1070	57.1	1066	56	0
Target_name	Start	End	Length	Cov(%)
AT3G27325.2	47	1121	1121	95.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold232	Augustus	mRNA	6633	20338	.	-	.	ID=Dca23254.1;Parent=Dca23254
scaffold232	Augustus	exon	6633	6956	.	-	.	ID=Dca23254.1.exon1;Parent=Dca23254.1
scaffold232	Augustus	exon	7344	7470	.	-	.	ID=Dca23254.1.exon2;Parent=Dca23254.1
scaffold232	Augustus	exon	8573	8712	.	-	.	ID=Dca23254.1.exon3;Parent=Dca23254.1
scaffold232	Augustus	exon	9102	9183	.	-	.	ID=Dca23254.1.exon4;Parent=Dca23254.1
scaffold232	Augustus	exon	9685	10013	.	-	.	ID=Dca23254.1.exon5;Parent=Dca23254.1
scaffold232	Augustus	exon	10516	10602	.	-	.	ID=Dca23254.1.exon6;Parent=Dca23254.1
scaffold232	Augustus	exon	10700	10863	.	-	.	ID=Dca23254.1.exon7;Parent=Dca23254.1
scaffold232	Augustus	exon	11158	11314	.	-	.	ID=Dca23254.1.exon8;Parent=Dca23254.1
scaffold232	Augustus	exon	11403	11522	.	-	.	ID=Dca23254.1.exon9;Parent=Dca23254.1
scaffold232	Augustus	exon	11618	11728	.	-	.	ID=Dca23254.1.exon10;Parent=Dca23254.1
scaffold232	Augustus	exon	12057	12233	.	-	.	ID=Dca23254.1.exon11;Parent=Dca23254.1
scaffold232	Augustus	exon	13149	13294	.	-	.	ID=Dca23254.1.exon12;Parent=Dca23254.1
scaffold232	Augustus	exon	13789	13975	.	-	.	ID=Dca23254.1.exon13;Parent=Dca23254.1
scaffold232	Augustus	exon	14060	14197	.	-	.	ID=Dca23254.1.exon14;Parent=Dca23254.1
scaffold232	Augustus	exon	14898	15066	.	-	.	ID=Dca23254.1.exon15;Parent=Dca23254.1
scaffold232	Augustus	exon	15160	15350	.	-	.	ID=Dca23254.1.exon16;Parent=Dca23254.1
scaffold232	Augustus	exon	15543	15791	.	-	.	ID=Dca23254.1.exon17;Parent=Dca23254.1
scaffold232	Augustus	exon	20024	20338	.	-	.	ID=Dca23254.1.exon18;Parent=Dca23254.1