Dca23325.1
Annotation
- 4-exons
- f-1
- sp|A5BRC3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_027576#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold2326)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23325.1 |
17 |
56 |
72 |
36.11 |
40 |
65 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZUJ1_ARATH |
668 |
707 |
1194 |
3.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23325.1 |
288 |
1250 |
1259 |
24.62 |
963 |
30 |
3e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
376 |
1376 |
1401 |
71.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2326 |
Augustus |
mRNA |
7075 |
11138 |
. |
- |
. |
ID=Dca23325.1;Parent=Dca23325 |
| scaffold2326 |
Augustus |
exon |
7075 |
8549 |
. |
- |
. |
ID=Dca23325.1.exon1;Parent=Dca23325.1 |
| scaffold2326 |
Augustus |
exon |
8660 |
8857 |
. |
- |
. |
ID=Dca23325.1.exon2;Parent=Dca23325.1 |
| scaffold2326 |
Augustus |
exon |
8941 |
10717 |
. |
- |
. |
ID=Dca23325.1.exon3;Parent=Dca23325.1 |
| scaffold2326 |
Augustus |
exon |
10809 |
11138 |
. |
- |
. |
ID=Dca23325.1.exon4;Parent=Dca23325.1 |
