Dca23339.1
Annotation
- 2-exons
- f-1
- sp|Q9SL12_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2328)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23339.1 |
46 |
372 |
373 |
32.97 |
327 |
37 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SL12_ARATH |
556 |
885 |
977 |
33.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23339.1 |
192 |
353 |
373 |
16.89 |
162 |
37 |
3e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24255.1 |
3 |
173 |
746 |
22.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2328 |
Augustus |
mRNA |
62670 |
64270 |
. |
+ |
. |
ID=Dca23339.1;Parent=Dca23339 |
| scaffold2328 |
Augustus |
exon |
62670 |
63140 |
. |
+ |
. |
ID=Dca23339.1.exon1;Parent=Dca23339.1 |
| scaffold2328 |
Augustus |
exon |
63620 |
64270 |
. |
+ |
. |
ID=Dca23339.1.exon2;Parent=Dca23339.1 |
