Carnation DB

Dca23368.1

Annotation

7-exons
f-1
sp|B9GW46_POPTR#MIKC mads-box transcription factor#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=MADS7#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
Repeat List (scaffold233)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23368.1	1	212	215	64.65	212	65	7e-67
Target_name	Start	End	Length	Cov(%)
sp\|B9GW46_POPTR	1	207	212	97.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23368.1	1	215	215	59.53	215	59	2e-59
Target_name	Start	End	Length	Cov(%)
AT4G22950.1	1	213	219	97.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold233	Augus-PASA	mRNA	153453	158263	.	+	.	ID=Dca23368.1;Parent=Dca23368
scaffold233	Augus-PASA	exon	153453	153634	.	+	.	ID=Dca23368.1.exon1;Parent=Dca23368.1
scaffold233	Augus-PASA	exon	156535	156622	.	+	.	ID=Dca23368.1.exon2;Parent=Dca23368.1
scaffold233	Augus-PASA	exon	156922	156983	.	+	.	ID=Dca23368.1.exon3;Parent=Dca23368.1
scaffold233	Augus-PASA	exon	157175	157274	.	+	.	ID=Dca23368.1.exon4;Parent=Dca23368.1
scaffold233	Augus-PASA	exon	157688	157729	.	+	.	ID=Dca23368.1.exon5;Parent=Dca23368.1
scaffold233	Augus-PASA	exon	157820	157861	.	+	.	ID=Dca23368.1.exon6;Parent=Dca23368.1
scaffold233	Augus-PASA	exon	158132	158263	.	+	.	ID=Dca23368.1.exon7;Parent=Dca23368.1