Carnation DB

Dca2338.1

Annotation

5-exons
f-1
sp|A5AK34_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_003578#unknown#0F0P0C
Repeat List (scaffold108)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2338.1	22	127	184	39.13	106	66	3e-31
Target_name	Start	End	Length	Cov(%)
sp\|A5AK34_VITVI	43	152	228	48.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2338.1	2	109	184	32.6	108	54	3e-24
Target_name	Start	End	Length	Cov(%)
AT1G71430.1	4	112	164	66.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold108	Augus-PASA	mRNA	11842	14258	.	+	.	ID=Dca2338.1;Parent=Dca2338
scaffold108	Augus-PASA	exon	11842	11902	.	+	.	ID=Dca2338.1.exon1;Parent=Dca2338.1
scaffold108	Augus-PASA	exon	12021	12113	.	+	.	ID=Dca2338.1.exon2;Parent=Dca2338.1
scaffold108	Augus-PASA	exon	13658	13728	.	+	.	ID=Dca2338.1.exon3;Parent=Dca2338.1
scaffold108	Augus-PASA	exon	13819	13881	.	+	.	ID=Dca2338.1.exon4;Parent=Dca2338.1
scaffold108	Augus-PASA	exon	13992	14258	.	+	.	ID=Dca2338.1.exon5;Parent=Dca2338.1