Dca23403.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2334)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23403.1 |
1 |
198 |
198 |
60.6 |
198 |
49 |
1e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1230 |
1474 |
1501 |
16.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23403.1 |
43 |
198 |
198 |
34.84 |
156 |
34 |
4e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
9 |
211 |
230 |
88.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2334 |
Augustus |
mRNA |
43949 |
44681 |
. |
+ |
. |
ID=Dca23403.1;Parent=Dca23403 |
| scaffold2334 |
Augustus |
exon |
43949 |
44199 |
. |
+ |
. |
ID=Dca23403.1.exon1;Parent=Dca23403.1 |
| scaffold2334 |
Augustus |
exon |
44336 |
44681 |
. |
+ |
. |
ID=Dca23403.1.exon2;Parent=Dca23403.1 |
