Carnation DB

Dca23410.1

Annotation

9-exons
f-1
sp|F6HUS4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g01220#GO:0003677#1F0P0C
sp|B9GXG3_POPTR#High mobility group family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HMGB913#GO:0003677#1F0P0C
Repeat List (scaffold2335)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23410.1	1	494	500	62.4	494	61	7e-143
Target_name	Start	End	Length	Cov(%)
sp\|F6HUS4_VITVI	1	497	505	98.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23410.1	323	497	500	11.2	175	32	9e-09
Target_name	Start	End	Length	Cov(%)
AT4G11080.1	158	319	446	36.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2335	Augustus	mRNA	42967	46100	.	-	.	ID=Dca23410.1;Parent=Dca23410
scaffold2335	Augustus	exon	42967	43086	.	-	.	ID=Dca23410.1.exon1;Parent=Dca23410.1
scaffold2335	Augustus	exon	43185	43269	.	-	.	ID=Dca23410.1.exon2;Parent=Dca23410.1
scaffold2335	Augustus	exon	43367	43458	.	-	.	ID=Dca23410.1.exon3;Parent=Dca23410.1
scaffold2335	Augustus	exon	43547	43717	.	-	.	ID=Dca23410.1.exon4;Parent=Dca23410.1
scaffold2335	Augustus	exon	43800	43865	.	-	.	ID=Dca23410.1.exon5;Parent=Dca23410.1
scaffold2335	Augustus	exon	44015	44120	.	-	.	ID=Dca23410.1.exon6;Parent=Dca23410.1
scaffold2335	Augustus	exon	44234	44505	.	-	.	ID=Dca23410.1.exon7;Parent=Dca23410.1
scaffold2335	Augustus	exon	44737	44865	.	-	.	ID=Dca23410.1.exon8;Parent=Dca23410.1
scaffold2335	Augustus	exon	45639	46100	.	-	.	ID=Dca23410.1.exon9;Parent=Dca23410.1