Carnation DB

Dca23417.1

Annotation

7-exons
f-910
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold2337)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23417.1	1	209	516	24.8	209	61	1e-72
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	474	683	1553	13.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23417.1	3	209	516	14.53	207	36	3e-32
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	130	340	707	29.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2337	Augustus	mRNA	33709	39684	.	+	.	ID=Dca23417.1;Parent=Dca23417
scaffold2337	Augustus	exon	33709	34076	.	+	.	ID=Dca23417.1.exon1;Parent=Dca23417.1
scaffold2337	Augustus	exon	34265	34364	.	+	.	ID=Dca23417.1.exon2;Parent=Dca23417.1
scaffold2337	Augustus	exon	34449	34611	.	+	.	ID=Dca23417.1.exon3;Parent=Dca23417.1
scaffold2337	Augustus	exon	34723	35629	.	+	.	ID=Dca23417.1.exon4;Parent=Dca23417.1
scaffold2337	Augustus	exon	35745	35803	.	+	.	ID=Dca23417.1.exon5;Parent=Dca23417.1
scaffold2337	Augustus	exon	36200	36496	.	+	.	ID=Dca23417.1.exon6;Parent=Dca23417.1
scaffold2337	Augustus	exon	39119	39684	.	+	.	ID=Dca23417.1.exon7;Parent=Dca23417.1