Carnation DB

Dca23477.1

Annotation

5-exons
f-1
sp|B9HCP7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1122718#GO:0030246;GO:0003824;GO:0005975#2F1P0C
sp|B9SMM6_RICCO#Lyase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0232040#GO:0030246;GO:0016829;GO:0005975#2F1P0C
Repeat List (scaffold2344)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23477.1	2	238	240	57.91	237	58	2e-76
Target_name	Start	End	Length	Cov(%)
sp\|B9HCP7_POPTR	56	295	674	35.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23477.1	3	240	240	57.91	238	58	8e-75
Target_name	Start	End	Length	Cov(%)
AT2G22620.1	62	300	677	35.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2344	Augustus	mRNA	22108	25080	.	-	.	ID=Dca23477.1;Parent=Dca23477
scaffold2344	Augustus	exon	22108	22540	.	-	.	ID=Dca23477.1.exon1;Parent=Dca23477.1
scaffold2344	Augustus	exon	22639	22743	.	-	.	ID=Dca23477.1.exon2;Parent=Dca23477.1
scaffold2344	Augustus	exon	22848	22904	.	-	.	ID=Dca23477.1.exon3;Parent=Dca23477.1
scaffold2344	Augustus	exon	23040	23161	.	-	.	ID=Dca23477.1.exon4;Parent=Dca23477.1
scaffold2344	Augustus	exon	25075	25080	.	-	.	ID=Dca23477.1.exon5;Parent=Dca23477.1